Catmaid

The Collaborative Annotation Toolkit for Massive Amounts of Image Data (CATMAID) is a web companion to the TrakEM2 software (Cardona, 2006) for management, registration and analysis of large-scale ssTEM datasets

Documentation

CATMAID documentation

@catmaid

Intro

CATMAID Datasets Hosted by VFB

Virtual Fly Brain (VFB) hosts several CATMAID instances for exploring connectomic reconstruction data. These datasets provide access to neuroanatomical data from various Drosophila electron microscopy projects. Full details are available on our hosted pages:

Adult Brain

Larval Brain

Comparative Studies

  • IAV-ROBO - Mechanosensory circuit study with shifted mechanosensory projections
  • IAV-TNT - Control dataset for comparative mechanosensory circuit studies

Each dataset includes browser-based visualization of EM data, neuron reconstructions, connectivity information, and programmatic access via APIs. VFB ensures the long-term availability of these resources to the research community.